dcsimg

Import Log for NMNH type specimens

  • Started: December 20, 2021 08:32
  • Completed: 18:43:41.000
  • Failed: 08:38:04.000
  • Status: completed

Events (most recent first):

  • 18:43:41.000 (ends) Complete
  • 18:43:41.000 (ends) TOTAL TIME: 10.0h
  • 18:43:41.000 (starts) TraitBank::Denormalizer.update_resource_vernaculars
  • 18:43:38.000 (starts) Resource#fix_native_nodes
  • 18:43:38.000 (warns) Trait Publishing failed: execution expired (Delayed::Worker.max_run_time is only 36000 seconds) FROM /app/lib/trait_bank/slurp.rb:366:in `sleep' << /app/lib/trait_bank/slurp.rb:366:in `block in break_up_large_file' << /app/lib/trait_bank/slurp.rb:357:in `break_up_large_file' << /app/lib/trait_bank/slurp.rb:343:in `break_up_large_files' << /app/lib/trait_bank/slurp.rb:289:in `load_csv' << /app/lib/trait_bank/slurp.rb:611:in `add_metadata'
  • 17:31:08.000 (infos) Waiting 4800 seconds for the last 'chunk' to be added to neo4j...
  • 17:30:13.000 (infos) Importing 250000 rows from publish_metadata_chunk_15.csv
  • 16:15:13.000 (infos) Waiting 4500 seconds for the last 'chunk' to be added to neo4j...
  • 16:14:19.000 (infos) Importing 250000 rows from publish_metadata_chunk_14.csv
  • 15:04:18.000 (infos) Waiting 4200 seconds for the last 'chunk' to be added to neo4j...
  • 15:03:25.000 (infos) Importing 250000 rows from publish_metadata_chunk_13.csv
  • 13:58:24.000 (infos) Waiting 3900 seconds for the last 'chunk' to be added to neo4j...
  • 13:57:30.000 (infos) Importing 250000 rows from publish_metadata_chunk_12.csv
  • 12:57:30.000 (infos) Waiting 3600 seconds for the last 'chunk' to be added to neo4j...
  • 12:56:36.000 (infos) Importing 250000 rows from publish_metadata_chunk_11.csv
  • 12:01:36.000 (infos) Waiting 3300 seconds for the last 'chunk' to be added to neo4j...
  • 12:00:43.000 (infos) Importing 250000 rows from publish_metadata_chunk_10.csv
  • 11:10:43.000 (infos) Waiting 3000 seconds for the last 'chunk' to be added to neo4j...
  • 11:09:48.000 (infos) Importing 250000 rows from publish_metadata_chunk_9.csv
  • 10:24:47.000 (infos) Waiting 2700 seconds for the last 'chunk' to be added to neo4j...
  • 10:23:56.000 (infos) Importing 250000 rows from publish_metadata_chunk_8.csv
  • 10:03:55.000 (infos) Waiting 1200 seconds for the last 'chunk' to be added to neo4j...
  • 10:03:04.000 (infos) Importing 250000 rows from publish_metadata_chunk_7.csv
  • 09:45:33.000 (infos) Waiting 1050 seconds for the last 'chunk' to be added to neo4j...
  • 09:44:41.000 (infos) Importing 250000 rows from publish_metadata_chunk_6.csv
  • 09:29:40.000 (infos) Waiting 900 seconds for the last 'chunk' to be added to neo4j...
  • 09:28:48.000 (infos) Importing 250000 rows from publish_metadata_chunk_5.csv
  • 09:16:17.000 (infos) Waiting 750 seconds for the last 'chunk' to be added to neo4j...
  • 09:15:26.000 (infos) Importing 250000 rows from publish_metadata_chunk_4.csv
  • 09:05:25.000 (infos) Waiting 600 seconds for the last 'chunk' to be added to neo4j...
  • 09:04:35.000 (infos) Importing 250000 rows from publish_metadata_chunk_3.csv
  • 08:57:04.000 (infos) Waiting 450 seconds for the last 'chunk' to be added to neo4j...
  • 08:56:12.000 (infos) Importing 250000 rows from publish_metadata_chunk_2.csv
  • 08:51:11.000 (infos) Waiting 300 seconds for the last 'chunk' to be added to neo4j...
  • 08:50:20.000 (infos) Importing 250000 rows from publish_metadata_chunk_1.csv
  • 08:50:19.000 (warns) Found 5637376 rows, will break up into 250000
  • 08:50:19.000 (infos) adding new metadata
  • 08:49:29.000 (infos) Importing 250000 rows from publish_traits_chunk_2.csv
  • 08:47:08.000 (infos) Importing 250000 rows from publish_traits_chunk_1.csv
  • 08:47:07.000 (warns) Found 359252 rows, will break up into 250000
  • 08:47:07.000 (infos) adding new traits
  • 08:47:07.000 (infos) removing all traits
  • 08:46:51.000 (infos) polling for trait diff metadata: /resources/520/publish_diffs.json?since=1639669329
  • 08:46:51.000 (starts) #publish_traits = TraitBank::Slurp.load_resource_from_repo
  • 08:46:51.000 (warns) There were NO new pages, skipping...
  • 08:46:17.000 (starts) create_new_pages
  • 08:46:16.000 (starts) PageCreator
  • 08:46:16.000 (starts) restoring vernacular preferences...
  • 08:46:16.000 (warns) MISSING https://beta-repo.eol.org/data/NMNHtypes/publish_content_sections.tsv [404] (9 bytes); skipping
  • 08:46:16.000 (starts) ContentSection